Lab Publications
Found 304 results
Author Title Type [ Year] Filters: First Letter Of Last Name is L [Clear All Filters]
Amyloid pathology–produced unexpected modifications of calcium homeostasis in hippocampal subicular dendrites.
Alzheimers. Dement..
(2019). Computer models of mouse area M1 show avalanches for full model and subcircuits defined by layer or cell type.
Society for Neuroscience 2019 (SFN '19).
(2019). Cross-frequency coupling and information flow in a multiscale model of M1 microcircuits.
Society for Neuroscience (SFN'19).
(2019). Data-driven model of auditory thalamocortical system rhythms.
Society for Neuroscience (SFN '19).
(2019). Data-driven model of auditory thalamocortical system rhythms.
Society for Neuroscience (SFN '19).
(2019). Dendritic resonance in a detailed model of pyramidal tract neuron of mouse primary motor cortex.
Society for Neuroscience 2019 (SFN '19).
(2019). Efficient in silico 3D intracellular neuron simulation.
Society for Neuroscience 2019 (SFN '19).
(2019). Homeostasis and spreading depolarization in multiscale simulation of ischemic stroke..
Society for Neuroscience 2018 (SFN '19).
(2019). Modeling network effects of dendritic plateau potentials in cortical pyramidal neurons.
Society for Neuroscience 2019 (SFN '19).
(2019). NetPyNE, a tool for data-driven multiscale modeling of brain circuits.
eLife. 8, e44494.
(2019). Parallel Stochastic Discrete Event Simulation of Calcium Dynamics in Neuron.
IEEE/ACM Trans. Comput. Biol. Bioinform.. 16, 1007–1019.
(2019). Parallel Stochastic Discrete Event Simulation of Calcium Dynamics in Neuron.
IEEE/ACM Trans. Comput. Biol. Bioinform.. 16, 1007–1019.
(2019). Response to simultaneous long-range inputs and oscillatory inputs in a multiscale model of M1 microcircuits.
Society for Neuroscience 2019 (SFN '19).
(2019). Tracking rhythmicity of neural oscillations in the auditory thalamocortical system.
Society for Neuroscience 2019 (SFN '19).
(2019). Tracking rhythmicity of neural oscillations in the auditory thalamocortical system.
Society for Neuroscience 2019 (SFN '19).
(2019). Building and visualizing reaction–diffusion simulations in NEURON.
Computational Neuroscience Meeting (CNS 18').
(2018). Building, simulating, and visualizing reaction-diffusion models with NEURON's enhanced rxd module.
Society for Neuroscience 2018 (SFN '18).
(2018). Credibility, Replicability, and Reproducibility in Simulation for Biomedicine and Clinical Applications in Neuroscience.
Front. Neuroinform.. 12,
(2018). Embedded ensemble encoding: A hypothesis for reconciling cortical coding strategies.
Society for Neuroscience 2018 (SFN '18).
(2018). Embedded ensemble encoding hypothesis: The role of the ``Prepared'' cell.
J. Neurosci. Res..
(2018). Extracellular reaction–diffusion in the NEURON simulator: modeling ischemic stroke.
Computational Neuroscience Meeting (CNS 18').
(2018). Genome-wide associations of schizophrenia studied with computer simulation.
(Cutsuridis, V., Graham BP., Cobb S., & Vida I., Ed.).Hippocampal Microcircuits: A Computational Modeler's Resource Book. 2,
(2018). Identifying avalanches in simulated mouse primary motor cortex (M1).
Society for Neuroscience 2018 (SFN '18).
(2018). Implementation of Cmicrocircuits model in NetPyNE and exploration of the effect of neuronal/synaptic loss on memory recall.
Computational Neuroscience Meeting (CNS 18').
(2018).
(2018). Modeling pathogenesis and treatment response in childhood absence epilepsy.
Epilepsia. 59, 135–145.
(2018). Multiscale modeling of brain disease.
Society for Neuroscience 2018 (SFN '18).
(2018). Multiscale simulation of spreading depolarization in ischemic stroke.
Society for Neuroscience 2018 (SFN '18).
(2018). NetPyNE: A GUI-based tool to build, simulate and analyze large-scale, data-driven network models in parallel NEURON.
Society for Neuroscience 2018 (SFN '18).
(2018). NetPyNE: a high-level interface to NEURON to facilitate the development, parallel simulation and analysis of data-driven multiscale network models.
Computational Neuroscience Meeting (CNS 18').
(2018).
(2018). Recruitment of neurons into neural ensembles based on dendritic plateau potentials.
Computational Neuroscience Meeting (CNS 18').
(2018). Recruitment of neurons into neural ensembles based on dendritic plateau potentials.
Society for Neuroscience 2018 (SFN '18).
(2018). Simulation of avalanches in mouse primary motor cortex (M1).
Computational Neuroscience Meeting (CNS 18').
(2018).
(2018). Using NEURON for reaction-diffusion modeling of extracellular dynamics.
Frontiers in Neuroinformatics.
(2018). 26th Annual Computational Neuroscience Meeting (CNS*2017): Part 1.
BMC Neuroscience. 18, 58.
(2017). 26th Annual Computational Neuroscience Meeting (CNS*2017): Part 1.
BMC Neuroscience. 18, 58.
(2017). 26th Annual Computational Neuroscience Meeting (CNS*2017): Part 1.
BMC Neuroscience. 18, 58.
(2017). 26th Annual Computational Neuroscience Meeting (CNS*2017): Part 1.
BMC Neuroscience. 18, 58.
(2017). 26th Annual Computational Neuroscience Meeting (CNS*2017): Part 1.
BMC Neuroscience. 18, 58.
(2017). Computer modeling for pharmacological treatments for dystonia.
Drug Discov Today: Dis Model. In Press.
(2017). Computer modeling of epilepsy: opportunities for drug discovery.
Drug Discov Today: Dis Model. In press.
(2017). Computer modeling of ischemic stroke.
Drug Discov Today: Dis Model. 30, In press.
(2017). Computers, causality and cure in epilepsy.
Brain. 140, 516-519.
(2017). Cortical ensembles based on dendritic plateau generation in the prefrontal cortex.
Society for Neuroscience 2017 (SFN '17).
(2017). Dendritic plateau generation model in cortical pyramidal neurons: A link to cortical ensembles.
Society for Neuroscience 2017 (SFN '17).
(2017). Evolutionary algorithm optimization of biological learning parameters in a biomimetic neuroprosthesis.
IBM Journal of Research and Development. 61, 6–1.
(2017). Geppetto: an open source visualisation and simulation platform for neuroscience.
Computational Neuroscience Meeting (CNS 17').
(2017). Geppetto: an open source visualisation and simulation platform for neuroscience.
Computational Neuroscience Meeting (CNS 17').
(2017). Load balancing for multi-threaded PDES of stochastic reaction-diffusion in neurons.
J Simulation. 11, 267.
(2017). Load balancing for multi-threaded PDES of stochastic reaction-diffusion in neurons.
J Simulation. 11, 267.
(2017). Long-range inputs and H-current regulate different modes of operation in a multiscale model of mouse M1 microcircuits.
Society for Neuroscience 2017 (SFN '17).
(2017). Measurement of peripheral vision reaction time identifies white matter disruption in patients with mild traumatic brain injury.
J Neurotrauma.
(2017). Modeling electrodiffusion with the NEURON reaction-diffusion module.
Society for Neuroscience 2017 (SFN '17).
(2017). Multiscale computer modeling of penumbral zones in brain ischemia.
Society for Neuroscience 2017 (SFN '17).
(2017). Multiscale modeling in the clinic: diseases of the brain and nervous system.
Brain Inform. 4, 219-230.
(2017). Multithreaded Stochastic PDES for Reactions and Diffusions in Neurons.
ACM Transactions on Modeling and Computer Simulation (TOMACS). 27, 7.
(2017). Multithreaded Stochastic PDES for Reactions and Diffusions in Neurons.
ACM Transactions on Modeling and Computer Simulation (TOMACS). 27, 7.
(2017). Optimizing computer models of corticospinal neurons to replicate in vitro dynamics.
J Neurophysiol. 117, 148-162.
(2017). Parallel Stochastic discrete event simulation of calcium dynamics in neuron..
IEEE/ACM transactions on computational biology and bioinformatics.
(2017). Parallel stochastic spines in NEURON reaction-diffusion simulations.
Society for Neuroscience 2017 (SFN '17).
(2017). Site-directed mRNA editing of sodium channels has potential to alter neuronal firing and network dynamics: Computer models.
Society for Neuroscience 2017 (SFN '17).
(2017). Tracking recurrence of correlation structure in neuronal recordings.
J Neurosci Methods. 275, 1-9.
(2017). 25th Annual Computational Neuroscience Meeting: CNS-2016.
BMC Neuroscience. 17, 54.
(2016). 25th Annual Computational Neuroscience Meeting: CNS-2016.
BMC Neuroscience. 17, 54.
(2016). 25th Annual Computational Neuroscience Meeting: CNS-2016.
BMC Neuroscience. 17, 54.
(2016). 25th Annual Computational Neuroscience Meeting: CNS-2016.
BMC Neuroscience. 17, 54.
(2016). 25th Annual Computational Neuroscience Meeting: CNS-2016.
BMC Neuroscience. 17, 54.
(2016). 25th Annual Computational Neuroscience Meeting: CNS-2016.
BMC Neuroscience. 17, 54.
(2016). 25th Annual Computational Neuroscience Meeting: CNS-2016.
BMC Neuroscience. 17, 54.
(2016). 25th Annual Computational Neuroscience Meeting: CNS-2016.
BMC Neuroscience. 17, 54.
(2016). 25th Annual Computational Neuroscience Meeting: CNS-2016.
BMC Neuroscience. 17, 54.
(2016). 25th Annual Computational Neuroscience Meeting: CNS-2016.
BMC Neuroscience. 17, 54.
(2016). 25th Annual Computational Neuroscience Meeting: CNS-2016.
BMC Neuroscience. 17, 54.
(2016).