Lab Publications
Neuronal network bump attractors augmented by calcium up-regulation of Ih in a multiscale computer model of prefrontal cortex.
Society for Neuroscience 2015 (SFN '15).
(2015). Neuron time warp.
Simulation Conference (WSC), 2014 Winter. 3447–3458.
(2014). Neural discoordination of hippocampus and prefrontal cortex spike trains in a phencyclidine schizophrenia-related animal model.
Society for Neuroscience 2009 (SFN '09).
(2009). Neuronal calcium wave propagation varies with changes in endoplasmic reticulum parameters: a computer model.
Neural Comput. 27, 898–924.
(2015). Network-level coincidence detection in a computer simulation of primary motor cortex.
Society for Neuroscience 2013 (SFN '13).
(2013). Neocortical simulation for epilepsy surgery guidance: localization and intervention.
(Bass, B., & Garbey M., Ed.).Computational Surgery and Dual Training. 339–349.
(2014). Neural query system: data-mining from within the NEURON simulator.
Neuroinformatics. 4, 163-176.
(2006). Ntw-mt: A multi-threaded simulator for reaction diffusion simulations in neuron.
Proceedings of the 3rd ACM SIGSIM Conference on Principles of Advanced Discrete Simulation. 157–167.
(2015). Network-level effects of optogenetic stimulation in a computer model of macaque primary motor cortex.
BMC Neuroscience. 15, P107.
(2014). Network-level effects of optogenetic stimulation in a computer model of macaque primary motor cortex.
Computational Neuroscience Meeting (CNS 14').
(2014). NetPyNE: a high-level interface to NEURON to facilitate the development, parallel simulation and analysis of data-driven multiscale network models.
Computational Neuroscience Meeting (CNS 18').
(2018). NetPyNE: a Python package for NEURON to facilitate development and parallel simulation of biological neuronal networks.
Computational Neuroscience.
(2016). NetPyNE, a tool for data-driven multiscale modeling of brain circuits.
eLife. 8, e44494.
(2019). NetPyNE: A GUI-based tool to build, simulate and analyze large-scale, data-driven network models in parallel NEURON.
Society for Neuroscience 2018 (SFN '18).
(2018).
(2018). Normalized cortical depth (NCD) as a primary coordinate system for cell connectivity in cortex: experiment and model.
Society for Neuroscience 2015 (SFN '15).
(2015). NetPyNE: a Python package for NEURON to facilitate development and parallel simulation of biological neuronal networks.
Computational Neuroscience Meeting (CNS 16').
(2016).